Association of HLA locus variant in Parkinson's disease

Clin Genet. 2013 Nov;84(5):501-4. doi: 10.1111/cge.12024. Epub 2012 Oct 29.

Abstract

A variant (rs3129882) in the genome-wide association study (GWAS)-linked variant [in the human leukocyte antigen (HLA) gene region] has been reported to associate with an increased risk of Parkinson's disease (PD) in Caucasian population. Studies among Chinese are limited. To address this, we analysed rs3129882 in a total of 1312 subjects of Chinese ethnicity from independent Asian centers comprising of 675 controls and 637 PD cases. The rs3129882 variant was associated with a decreased risk in our ethnic Chinese PD patients. Logistic regression analysis taking into consideration variables of age, gender and race showed that allele A reduced the risk of PD via a dominant model [odds ratio (OR) = 0.77, 95% confidence interval (CI) = 0.62, 0.96, p = 0.018]. As HLA is a highly polymorphic region, it is possible that ethnic-specific effect or environmental agents may modulate the effect of this GWAS-linked locus in influencing the risk of PD.

Keywords: Chinese; Parkinson's disease; gene; polymorphism.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aged
  • Asian People
  • Case-Control Studies
  • Female
  • Genetic Association Studies
  • Genetic Loci
  • HLA-DR alpha-Chains / genetics*
  • Humans
  • Immunity, Innate / genetics*
  • Inflammation / ethnology
  • Inflammation / genetics
  • Male
  • Middle Aged
  • Parkinson Disease / ethnology
  • Parkinson Disease / genetics*
  • Polymorphism, Single Nucleotide*

Substances

  • HLA-DR alpha-Chains