Overcoming transcription activator-like effector (TALE) DNA binding domain sensitivity to cytosine methylation

J Biol Chem. 2012 Nov 9;287(46):38427-32. doi: 10.1074/jbc.C112.408864. Epub 2012 Sep 26.

Abstract

Within the past 2 years, transcription activator-like effector (TALE) DNA binding domains have emerged as the new generation of engineerable platform for production of custom DNA binding domains. However, their recently described sensitivity to cytosine methylation represents a major bottleneck for genome engineering applications. Using a combination of biochemical, structural, and cellular approaches, we were able to identify the molecular basis of such sensitivity and propose a simple, drug-free, and universal method to overcome it.

MeSH terms

  • Animals
  • Base Sequence
  • CHO Cells
  • Cricetinae
  • Cytosine / chemistry*
  • DNA / genetics
  • DNA Methylation*
  • Epigenesis, Genetic
  • Gene Silencing
  • Genetic Engineering / methods
  • Genetic Therapy / methods
  • HEK293 Cells
  • Homeodomain Proteins / genetics*
  • Homeodomain Proteins / physiology*
  • Humans
  • Molecular Sequence Data
  • Mutagenesis
  • Protein Binding
  • Protein Engineering / methods
  • Protein Structure, Tertiary
  • Recombinant Proteins / chemistry
  • Repressor Proteins / genetics*
  • Repressor Proteins / physiology*

Substances

  • Homeodomain Proteins
  • Recombinant Proteins
  • Repressor Proteins
  • TGIF1 protein, human
  • Cytosine
  • DNA