Translational recoding in archaea

Extremophiles. 2012 Nov;16(6):793-803. doi: 10.1007/s00792-012-0482-8. Epub 2012 Sep 27.

Abstract

Translational recoding includes a group of events occurring during gene translation, namely stop codon readthrough, programmed ±1 frameshifting, and ribosome bypassing, which have been found in organisms from all domains of life. They serve to regulate protein expression at translational level and represent a relatively less known exception to the traditional central 'dogma' of biology that information flows as DNA→RNA→protein and that it is stored in a co-linear way between the 5'→3' of nucleic acids and N→C-terminal of polypeptides. In archaea, in which translational recoding regulates the decoding of the 21st and the 22nd amino acids selenocysteine and pyrrolysine, respectively, only one case of programmed -1 frameshifting has been reported so far and further examples, although promising, have not been confirmed yet. We here summarize the current state-of-the-art of this field that, especially in archaea, has relevant implications for the physiology of life in extreme environments and for the origin of life.

Publication types

  • Research Support, Non-U.S. Gov't
  • Review

MeSH terms

  • Archaea / genetics*
  • Archaea / metabolism
  • Archaeal Proteins / biosynthesis*
  • Archaeal Proteins / genetics
  • Frameshifting, Ribosomal*
  • Lysine / analogs & derivatives
  • Lysine / metabolism
  • Selenocysteine / metabolism

Substances

  • Archaeal Proteins
  • Selenocysteine
  • pyrrolysine
  • Lysine