Carbamoyl pyridone HIV-1 integrase inhibitors. 1. Molecular design and establishment of an advanced two-metal binding pharmacophore

J Med Chem. 2012 Oct 25;55(20):8735-44. doi: 10.1021/jm3010459. Epub 2012 Oct 4.

Abstract

Our group has focused on expanding the scope of a two-metal binding pharmacophore concept to explore HIV-1 integrase inhibitors through medicinal chemistry efforts to design novel scaffolds which allow for improvement of pharmacokinetic (PK) and resistance profiles. A novel chelating scaffold was rationally designed to effectively coordinate two magnesium cofactors and to extend an aromatic group into an optimal hydrophobic pharmacophore space. The new chemotype, consisting of a carbamoyl pyridone core unit, shows high inhibitory potency in both enzymatic and antiviral assay formats with low nM IC₅₀ and encouraging potency shift effects in the presence of relevant serum proteins. The new inhibitor design displayed a remarkable PK profile suggestive of once daily dosing without the need for a PK booster as demonstrated by robust drug concentrations at 24 h after oral dosing in rats, dogs, and cynomolgus monkeys.

MeSH terms

  • Animals
  • Antiviral Agents / chemical synthesis*
  • Antiviral Agents / pharmacokinetics
  • Antiviral Agents / pharmacology
  • Cations, Divalent
  • Cell Line
  • Chelating Agents / chemical synthesis*
  • Chelating Agents / pharmacokinetics
  • Chelating Agents / pharmacology
  • Dogs
  • Drug Design
  • Drug Resistance, Viral
  • HIV-1 / drug effects
  • HIV-1 / enzymology*
  • HIV-1 / genetics
  • Humans
  • Integrase Inhibitors / chemical synthesis*
  • Integrase Inhibitors / pharmacokinetics
  • Integrase Inhibitors / pharmacology
  • Macaca fascicularis
  • Magnesium / metabolism*
  • Models, Molecular
  • Mutation
  • Pyridones / chemical synthesis*
  • Pyridones / pharmacokinetics
  • Pyridones / pharmacology
  • Rats

Substances

  • Antiviral Agents
  • Cations, Divalent
  • Chelating Agents
  • Integrase Inhibitors
  • Pyridones
  • Magnesium