Olleya namhaensis sp. nov., isolated from wood falls, and emended description of the genus Olleya Mancuso Nichols et al. 2005 emend. Lee et al. 2010

Int J Syst Evol Microbiol. 2013 May;63(Pt 5):1610-1615. doi: 10.1099/ijs.0.044131-0. Epub 2012 Aug 17.

Abstract

A Gram-stain-negative, non-flagellated, gliding, rod-shaped bacterial strain, designated WT-MY15(T), was isolated from wood falls in the South Sea in Korea and subjected to a polyphasic taxonomic study. Strain WT-MY15(T) grew optimally at pH 7.0-8.0, at 25 °C and in the presence of 2.0 % (w/v) NaCl. Phylogenetic analyses based on 16S rRNA gene sequences showed that strain WT-MY15(T) clustered with the type strains of two Olleya species, exhibiting 16S rRNA gene sequence similarity values of 97.7-98.1 %. Strain WT-MY15(T) contained MK-6 as the predominant menaquinone. The fatty acid and polar lipid profiles of strain WT-MY15(T) were similar to those of Olleya aquimaris L-4(T) and Olleya marilimosa CIP 108537(T). The DNA G+C content of strain WT-MY15(T) was 42.8 mol% and its mean DNA-DNA relatedness values with O. aquimaris L-4(T) and O. marilimosa CIP 108537(T) were 8.3 and 5.6 %, respectively. The phylogenetic and genetic distinctiveness and differential phenotypic properties revealed that strain WT-MY15(T) is separate from the two recognized species of the genus Olleya. On the basis of the data presented, strain WT-MY15(T) is considered to represent a novel species of the genus Olleya, for which the name Olleya namhaensis sp. nov. is proposed. The type strain is WT-MY15(T) ( = KCTC 23673(T) = CCUG 61507(T)). An emended description of the genus Olleya is also presented.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Typing Techniques
  • Base Composition
  • DNA, Bacterial / genetics
  • Fatty Acids
  • Flavobacteriaceae / classification*
  • Flavobacteriaceae / genetics
  • Flavobacteriaceae / isolation & purification
  • Molecular Sequence Data
  • Nucleic Acid Hybridization
  • Phylogeny*
  • RNA, Ribosomal, 16S / genetics
  • Republic of Korea
  • Seawater / microbiology*
  • Sequence Analysis, DNA
  • Vitamin K 2 / analogs & derivatives
  • Vitamin K 2 / analysis
  • Wood / microbiology*

Substances

  • DNA, Bacterial
  • Fatty Acids
  • RNA, Ribosomal, 16S
  • Vitamin K 2
  • menaquinone 6

Associated data

  • GENBANK/JQ327134