Characterization of a new cold-adapted lipase from Pseudomonas sp. TK-3

Appl Biochem Biotechnol. 2012 Sep;168(2):327-38. doi: 10.1007/s12010-012-9776-7. Epub 2012 Jun 30.

Abstract

A psychrotrophic Pseudomonas sp. TK-3 was isolated from dirty and cool stream water in Toyama, Japan from which we cloned and characterized the bacterial lipase LipTK-3. The sequenced DNA fragment contains an open reading frame of 1,428 bp that encoded a protein of 476 amino acids with an estimated molecular mass of 50,132 Da. The lipase showed high sequence similarity to those of subfamily Ι.3 lipase and had a conserved GXSXG motif around the catalytic Ser residue. Its optimal temperature was 20-25 °C, lower than in most other subfamily Ι.3 lipases. The lipase exhibited about 30 % of maximal activity at 5 °C. The optimal pH value was 8.0. The activity was strongly inhibited by EDTA and was highly dependent on Ca(2+). Tricaprylin and p-nitrophenyl caprylate were the most favorable substrates among the triglycerides and p-nitrophenyl esters, respectively. LipTK-3 also showed high activity towards natural substrates including edible vegetable oils and animal fats. Furthermore, LipTK-3 was very active and stable in the presence of several detergents, metal ions, and organic solvents. This cold-adapted lipase may prove useful for future applications.

MeSH terms

  • Adaptation, Physiological*
  • Amino Acid Sequence
  • Cloning, Molecular
  • Cold Temperature*
  • Fresh Water / microbiology
  • Lipase / chemistry
  • Lipase / genetics*
  • Lipase / isolation & purification
  • Lipase / metabolism*
  • Molecular Sequence Data
  • Pseudomonas / enzymology*
  • Pseudomonas / genetics
  • Pseudomonas / isolation & purification
  • Pseudomonas / physiology*

Substances

  • Lipase