Long directional interactions (LDIs) in oligomeric cofacial silicon phthalocyanines and other oligomeric and polymeric cofacial phthalocyanines

J Phys Chem A. 2012 Aug 30;116(34):8718-30. doi: 10.1021/jp3025182. Epub 2012 Aug 17.

Abstract

Crystal structures have been determined for the three-member set of cofacial silicon phthalocyanines, ((n-C(6)H(13))(3)SiO)[SiPcO](1-3)(Si(n-C(6)H(13))(3)). The staggering angles between adjacent rings in the dimer and trimer of this set are ∼16°. The interactions leading to these angles have been investigated by the atoms-in-molecules (AIM) and reduced-density-gradient (RDG) methods. The results show that long directional interactions (LDIs) are responsible for these angles. A survey of the staggering angles in various cofacial phthalocyanines described in the literature has revealed the existence of significant LDIs in a number of them. It is apparent that in many cases the ability of LDIs to dominate the forces giving rise to the staggering angles observed in cofacial phthalocyanines depends on their inter-ring separations.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Crystallography, X-Ray
  • Dimerization*
  • Indoles / chemistry*
  • Models, Molecular
  • Molecular Conformation
  • Organosilicon Compounds / chemistry*
  • Oxygen / chemistry
  • Polymers / chemical synthesis
  • Polymers / chemistry*
  • Spectrum Analysis

Substances

  • Indoles
  • Organosilicon Compounds
  • Polymers
  • silicon phthalocyanine
  • Oxygen