Enhancement of the substrate scope of transketolase

Chembiochem. 2012 Sep 3;13(13):1921-31. doi: 10.1002/cbic.201200240. Epub 2012 Jul 23.

Abstract

To enhance the activity of transketolase towards nonphosphorylated substrates and enlarge the scope of its substrates, notably to long polyol aldehyde acceptors (D-ribose or D-glucose), a rational design-supported evolution strategy was applied. By using docking experiments, an in silico library, and iterative mutagenesis, libraries of single- and double-point mutants were designed and generated. A double-screening approach was implemented, coupling a preselection activity assay (HPLC method) and a selective assay (GC method) to find the best enzymes. Several mutants (R526N, R526Q, R526Q/S525T, R526K/S525T) showed improved activities towards nonphosphorylated substrates as the coupled products of lithium hydroxypyruvate (HPA) with glycolaldehyde (GO), D-ribose or D-glucose. These mutated enzymes were further characterised. They were shown to be up to four times more active than the wild-type (mutant R526Q/S525T) for nonphosphorylated substrates LiHPA/GO (V(m) /K(m) for LiHPA = 92.4 instead of 28.8×10(-3) min(-1) for the wild-type) and 2.6 times more active for substrates LiHPA/rib.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acetaldehyde / analogs & derivatives
  • Acetaldehyde / metabolism
  • Computational Biology
  • Directed Molecular Evolution
  • Escherichia coli / genetics*
  • Escherichia coli / metabolism
  • Escherichia coli Proteins / genetics*
  • Escherichia coli Proteins / metabolism
  • Glucose / metabolism
  • Models, Molecular
  • Mutation
  • Protein Engineering*
  • Pyruvates / metabolism
  • Recombinant Proteins / genetics
  • Recombinant Proteins / metabolism
  • Ribose / metabolism
  • Saccharomyces cerevisiae / genetics*
  • Saccharomyces cerevisiae / metabolism
  • Saccharomyces cerevisiae Proteins / genetics*
  • Saccharomyces cerevisiae Proteins / metabolism
  • Substrate Specificity
  • Transketolase / genetics*
  • Transketolase / metabolism

Substances

  • Escherichia coli Proteins
  • Pyruvates
  • Recombinant Proteins
  • Saccharomyces cerevisiae Proteins
  • Ribose
  • hydroxypyruvic acid
  • Transketolase
  • Acetaldehyde
  • Glucose
  • glycolaldehyde