Isolation of ssDNA aptamers that inhibit rabies virus

Int Immunopharmacol. 2012 Nov;14(3):341-7. doi: 10.1016/j.intimp.2012.06.019. Epub 2012 Jul 4.

Abstract

Aptamers, functional nucleic acids, capable of binding a variety of molecular targets with high affinity and specificity, have emerged as promising therapeutic agents. In this study, the cell surface-systematic evolution of ligands by exponential enrichment (Cell-SELEX) strategy was used to generate DNA aptamers which targeted to the intact rabies virus-infected live cells. Through 35 iterative rounds of selection, five high-affinity single-stranded DNA (ssDNA) aptamers were generated by cell-SELEX. Virus titer assay and real-time quantitative reverse transcription PCR (qRT-PCR) assay revealed that all five aptamers could inhibit replication of rabies virus (RABV) in cultured baby hamster kidney (BHK)-21 cells; and T14 and F34 aptamers were most effective. The qRT-PCR also showed a dose-dependent inhibitory effect in BHK-21 cells. Collectively, these data show the feasibility of generating functionally effective aptamers against rabies virus-infected cells by the Cell-SELEX iterative procedure. These aptamers may prove clinically useful as therapeutic molecules with specific antiviral potential against RABV infections.

MeSH terms

  • Animals
  • Antiviral Agents / pharmacology*
  • Aptamers, Nucleotide / pharmacology*
  • Cell Line
  • Cricetinae
  • DNA, Single-Stranded*
  • Rabies virus / drug effects*
  • Rabies virus / growth & development
  • SELEX Aptamer Technique

Substances

  • Antiviral Agents
  • Aptamers, Nucleotide
  • DNA, Single-Stranded