Associations among genotype, clinical phenotype, and intracellular localization of trafficking proteins in ARC syndrome

Hum Mutat. 2012 Dec;33(12):1656-64. doi: 10.1002/humu.22155. Epub 2012 Aug 6.

Abstract

Arthrogryposis-renal dysfunction-cholestasis (ARC) syndrome is a rare autosomal recessive multisystem disorder caused by mutations in vacuolar protein sorting 33 homologue B (VPS33B) and VPS33B interacting protein, apical-basolateral polarity regulator (VIPAR). Cardinal features of ARC include congenital joint contractures, renal tubular dysfunction, cholestasis, severe failure to thrive, ichthyosis, and a defect in platelet alpha-granule biogenesis. Most patients with ARC do not survive past the first year of life. We report two patients presenting with a mild ARC phenotype, now 5.5 and 3.5 years old. Both patients were compound heterozygotes with the novel VPS33B donor splice-site mutation c.1225+5G>C in common. Immunoblotting and complementary DNA analysis suggest expression of a shorter VPS33B transcript, and cell-based assays show that c.1225+5G>C VPS33B mutant retains some ability to interact with VIPAR (and thus partial wild-type function). This study provides the first evidence of genotype-phenotype correlation in ARC and suggests that VPS33B c.1225+5G>C mutation predicts a mild ARC phenotype. We have established an interactive online database for ARC (https://grenada.lumc.nl/LOVD2/ARC) comprising all known variants in VPS33B and VIPAR. Also included in the database are 15 novel pathogenic variants in VPS33B and five in VIPAR.

Publication types

  • Case Reports

MeSH terms

  • Arthrogryposis / diagnosis*
  • Arthrogryposis / genetics*
  • Carrier Proteins / genetics*
  • Child, Preschool
  • Cholestasis / diagnosis*
  • Cholestasis / genetics*
  • Female
  • Genetic Association Studies*
  • HEK293 Cells
  • Heterozygote
  • Humans
  • Male
  • Models, Molecular
  • Molecular Diagnostic Techniques
  • Protein Transport
  • RNA Splice Sites
  • Renal Insufficiency / diagnosis*
  • Renal Insufficiency / genetics*
  • Sequence Analysis, DNA
  • Vesicular Transport Proteins / genetics*

Substances

  • Carrier Proteins
  • RNA Splice Sites
  • VIPAS39 protein, human
  • VPS33B protein, human
  • Vesicular Transport Proteins

Supplementary concepts

  • Arthrogryposis renal dysfunction cholestasis syndrome