Biodegradable plastic-degrading enzyme from Pseudozyma antarctica: cloning, sequencing, and characterization

Appl Microbiol Biotechnol. 2013 Apr;97(7):2951-9. doi: 10.1007/s00253-012-4188-8. Epub 2012 Jun 8.

Abstract

Pseudozyma antarctica JCM 10317 exhibits a strong degradation activity for biodegradable plastics (BPs) such as agricultural mulch films composed of poly(butylene succinate) (PBS) and poly(butylene succinate-co-adipate) (PBSA). An enzyme named PaE was isolated and the gene encoding PaE was cloned from the strain by functional complementation in Saccharomyces cerevisiae. The deduced amino acid sequence of PaE contains 198 amino acids with a predicted molecular weight of 20,362.41. High identity was observed between this sequence and that of cutinase-like enzymes (CLEs) (61-68%); therefore, the gene encoding PaE was named PaCLE1. The specific activity of PaE against emulsified PBSA was 54.8±6.3 U/mg. In addition to emulsified BPs, PaE degraded solid films of PBS, PBSA, poly(ε-caprolactone), and poly(lactic acid).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adipates / metabolism
  • Amino Acid Sequence
  • Biotransformation
  • Butylene Glycols / metabolism
  • Carboxylic Ester Hydrolases / chemistry
  • Carboxylic Ester Hydrolases / genetics
  • Carboxylic Ester Hydrolases / metabolism*
  • Cloning, Molecular
  • DNA, Fungal / chemistry
  • DNA, Fungal / genetics
  • Molecular Sequence Data
  • Molecular Weight
  • Plastics / metabolism*
  • Polymers / metabolism
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / genetics
  • Recombinant Proteins / metabolism
  • Saccharomyces cerevisiae / genetics
  • Sequence Analysis, DNA
  • Sequence Homology, Amino Acid
  • Succinates / metabolism
  • Ustilaginales / enzymology*
  • Ustilaginales / genetics

Substances

  • Adipates
  • Butylene Glycols
  • DNA, Fungal
  • Plastics
  • Polymers
  • Recombinant Proteins
  • Succinates
  • bionole
  • poly(butylene succinate-co-butylene adipate)
  • Carboxylic Ester Hydrolases

Associated data

  • GENBANK/DM067526