SYNCSA--R tool for analysis of metacommunities based on functional traits and phylogeny of the community components

Bioinformatics. 2012 Aug 1;28(15):2067-8. doi: 10.1093/bioinformatics/bts325. Epub 2012 Jun 4.

Abstract

Summary: SYNCSA is an R package for the analysis of metacommunities based on functional traits and phylogeny of the community components. It offers tools to calculate several matrix correlations that express trait-convergence assembly patterns, trait-divergence assembly patterns and phylogenetic signal in functional traits at the species pool level and at the metacommunity level.

Availability and implementation: SYNCSA is a package for the R environment, under a GPL-2 open-source license and freely available on CRAN official web server for R (http://cran.r-project.org).

Contact: vanderleidebastiani@yahoo.com.br.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Biota*
  • Computational Biology / methods
  • Ecology / methods*
  • Phylogeny*
  • Software*