BioMercator V3: an upgrade of genetic map compilation and quantitative trait loci meta-analysis algorithms

Bioinformatics. 2012 Aug 1;28(15):2082-3. doi: 10.1093/bioinformatics/bts313. Epub 2012 Jun 1.

Abstract

Summary: Compilation of genetic maps combined to quantitative trait loci (QTL) meta-analysis has proven to be a powerful approach contributing to the identification of candidate genes underlying quantitative traits. BioMercator was the first software offering a complete set of algorithms and visualization tool covering all steps required to perform QTL meta-analysis. Despite several limitations, the software is still widely used. We developed a new version proposing additional up to date methods and improving graphical representation and exploration of large datasets.

Availability and implementation: BioMercator V3 is implemented in JAVA and freely available (http://moulon.inra.fr/biomercator)

Contact: joets@moulon.inra.fr.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Algorithms*
  • Chromosome Mapping / methods*
  • Computational Biology / methods
  • Meta-Analysis as Topic
  • Quantitative Trait Loci*
  • Software*