Fluorometric detection of adenine in target DNA by exciplex formation with fluorescent 8-arylethynylated deoxyguanosine

Bioorg Med Chem Lett. 2012 Jun 1;22(11):3723-6. doi: 10.1016/j.bmcl.2012.04.011. Epub 2012 Apr 10.

Abstract

We demonstrated an intriguing method to discriminate adenine by incident appearance of an intense new emission via exciplex formation in hybridization of target DNA with newly designed fluorescent 8-arylethynylated deoxyguanosine derivatives. We described the synthesis of such highly electron donating fluorescent guanosine derivatives and their incorporation into DNA oligomers which may be used for the structural study and the fluorometric analysis of nucleic acids.

MeSH terms

  • Adenine / analysis*
  • Base Sequence
  • DNA / analysis*
  • Deoxyguanosine / analogs & derivatives*
  • Fluorescent Dyes / chemistry*
  • Fluorometry*
  • Nucleic Acid Hybridization
  • Oligodeoxyribonucleotides / chemistry

Substances

  • Fluorescent Dyes
  • Oligodeoxyribonucleotides
  • DNA
  • Deoxyguanosine
  • Adenine