Microsatellite markers for Grosmannia alacris (Ophiostomataceae, Ascomycota) and other species in the G. serpens complex

Am J Bot. 2012 May;99(5):e216-9. doi: 10.3732/ajb.1100527. Epub 2012 Apr 26.

Abstract

Premise of the study: Polymorphic microsatellite markers were developed for the pine-infecting fungus, Grosmannia alacris.

Methods and results: Sixteen microsatellite markers were developed by using inter-simple sequence repeat (ISSR)-PCRs and 454 sequencing methods. Seven of these markers showed polymorphisms for a South African population of G. alacris, and 13 markers showed polymorphism when European isolates were included. Most of the primer pairs also amplified four closely related species: G. serpens, Leptographium gibbsii, L. castellanum, and L. yamaokae.

Conclusions: These new markers will be useful for population studies of G. alacris and other species in the G. serpens complex.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Genetic Loci / genetics
  • Microsatellite Repeats / genetics*
  • Molecular Sequence Data
  • Ophiostomatales / genetics*
  • South Africa

Associated data

  • GENBANK/JN944519
  • GENBANK/JN944520
  • GENBANK/JN944521
  • GENBANK/JN944522
  • GENBANK/JN944523
  • GENBANK/JN944524
  • GENBANK/JN944525
  • GENBANK/JN944526
  • GENBANK/JN944527
  • GENBANK/JN944528
  • GENBANK/JN944529
  • GENBANK/JN944530
  • GENBANK/JN944531
  • GENBANK/JN944532
  • GENBANK/JN944533
  • GENBANK/JN944534