Identification of cellulase gene from the metagenome of Equus burchelli fecal samples and functional characterization of a novel bifunctional cellulolytic enzyme

Appl Biochem Biotechnol. 2012 May;167(1):132-41. doi: 10.1007/s12010-012-9660-5. Epub 2012 Apr 20.

Abstract

The metagenomic approach has been used successfully to isolate novel biocatalyst gene from uncultured microorganisms. The gene encoding exo-1,4-β-glucanase avicelase was amplified from the metagenome of the Equus burchelli fecal sample and cloned. The gene was found to be of 1,007 bp of nucleotide which encodes a protein of 318 amino acids with a calculated MW of 36 kDa. The deduced amino acid sequence was homologous with cellulases belonging to the glycosyl hydrolases 6 superfamily. The expressed protein was active towards the substrates avicel and carboxymethyl cellulose, indicating that it has bifunctional cellulolytic enzyme activity. The recombinant protein showed an activity of 5.23 U with specific activity of 6.8 U mg(-1) protein with the substrate avicel, while when CMC was used, an activity of 3.0 U with a specific activity of 4.2 U mg(-1) protein was achieved. Its optimum pH was determined to be 7.0 and optimum temperature of 35°C.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Bacteria / chemistry
  • Bacteria / enzymology*
  • Bacteria / genetics
  • Bacteria / isolation & purification
  • Bacterial Proteins / chemistry*
  • Bacterial Proteins / genetics*
  • Bacterial Proteins / metabolism
  • Cellulase / chemistry*
  • Cellulase / genetics*
  • Cellulase / metabolism
  • Cellulose / metabolism*
  • Cloning, Molecular
  • Enzyme Stability
  • Equidae
  • Feces / microbiology*
  • Kinetics
  • Metagenome*
  • Molecular Sequence Data
  • Sequence Alignment
  • Sequence Homology, Amino Acid
  • Substrate Specificity

Substances

  • Bacterial Proteins
  • Cellulose
  • Cellulase