[Application of an integrated omics analysis for the discovery of biomarkers for osteosarcoma]

Zhonghua Yi Xue Za Zhi. 2012 Jan 17;92(3):192-6.
[Article in Chinese]

Abstract

Objective: To apply an integrated omics analysis so as to discover potential biomarkers for an early diagnosis of osteosarcoma.

Methods: Gene chip and surface-enhanced laser desorption/ionization-time of flight-mass spectra (SELDI-TOF-MS) were employed to screen the marker genes and serum markers of osteosarcoma respectively. The associations of potential biomarkers from the SELDI data and microarray analysis were further inferred by Link-test to identify stable and specific diagnostic biomarkers.

Results: A total of 653 pre-biomarkers were found in osteosarcoma cells. And six differentially expressed protein peaks with strong statistical significances were detected by SELDI-TOF-MS in the patient's serum samples. Thirteen potential biomarkers for an early diagnosis of osteosarcoma were screened by Link-test.

Conclusion: As an effective method of identifying osteosarcoma biomarkers, the integrated omics analysis may serve as a monitoring platform for an early diagnosis of osteosarcoma.

Publication types

  • English Abstract
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Biomarkers, Tumor
  • Bone Neoplasms / blood
  • Bone Neoplasms / diagnosis*
  • Humans
  • Oligonucleotide Array Sequence Analysis
  • Osteosarcoma / blood
  • Osteosarcoma / diagnosis*
  • Protein Array Analysis / methods*
  • Proteomics / methods
  • Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization / methods

Substances

  • Biomarkers, Tumor