Carbonate-dissolving bacteria from 'miliolite', a bioclastic limestone, from Gopnath, Gujarat, Western India

Microbes Environ. 2012;27(3):334-7. doi: 10.1264/jsme2.me11347. Epub 2012 Mar 23.

Abstract

In the present investigation, the abundance and molecular phylogeny of part of the culturable bacterial population involved in the dissolution of "miliolite", a bioclastic limestone, from Gopnath, India, was studied. Carbonate-dissolving bacteria were isolated, enumerated and screened for their ability to dissolve miliolite. Amplified ribosomal DNA restriction analysis (ARDRA) indicated 14 operational taxonomic units (OTUs) to be distributed in 5 different clades at a similarity coefficient of 0.85. Then, 16S rRNA sequence analysis helped to decipher that the majority of carbonate-dissolving bacteria were affiliated to phyla Firmicutes (Families Bacillaceae and Staphylococcaceae) and Actinobacteria (Family Promicromonosporaceae) indicating their role in miliolite weathering.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacteria / classification*
  • Bacteria / isolation & purification*
  • Bacteria / metabolism
  • Calcium Carbonate*
  • Carbonates / metabolism*
  • Cluster Analysis
  • DNA Fingerprinting
  • DNA, Bacterial / chemistry
  • DNA, Bacterial / genetics
  • DNA, Ribosomal / chemistry
  • DNA, Ribosomal / genetics
  • Environmental Microbiology*
  • India
  • Molecular Sequence Data
  • Phylogeny
  • RNA, Ribosomal, 16S / genetics
  • Sequence Analysis, DNA

Substances

  • Carbonates
  • DNA, Bacterial
  • DNA, Ribosomal
  • RNA, Ribosomal, 16S
  • Calcium Carbonate

Associated data

  • GENBANK/JN092561
  • GENBANK/JN092562
  • GENBANK/JN092563
  • GENBANK/JN092564
  • GENBANK/JN092565
  • GENBANK/JN092566
  • GENBANK/JN092567
  • GENBANK/JN092568
  • GENBANK/JN092569
  • GENBANK/JN092570
  • GENBANK/JN092571
  • GENBANK/JN092572
  • GENBANK/JN092573
  • GENBANK/JN092574