PCR analysis of expR gene regulating biosynthesis of exopolysaccharides in Sinorhizobium meliloti

Biochem Mol Biol Educ. 2012 Mar-Apr;40(2):108-11. doi: 10.1002/bmb.20560. Epub 2011 Dec 7.

Abstract

Exopolysaccharide (EPS) production by the rhizobacterium Sinorhizobium meliloti is essential for root nodule formation on its legume host (alfalfa), and for establishment of a nitrogen-fixing symbiosis between the two partners. Production of EPS II (galactoglucan) by certain S. meliloti strains results in a mucoid colony phenotype. Other strains that are unable to produce EPS II display a dry phenotype, due to the presence of an insertion element in the gene expR, a key regulator involved in many important cellular processes, including production of low-molecular-weight EPS II. We describe a series of three programmed undergraduate biochemistry laboratory classes teaching PCR and electrophoresis procedures to detect non-functional expR loci in S. meliloti.

MeSH terms

  • Bacterial Proteins / genetics*
  • Biochemistry / education*
  • Curriculum
  • Electrophoresis, Agar Gel*
  • Gene Expression Regulation, Bacterial
  • Polymerase Chain Reaction*
  • Polysaccharides, Bacterial / biosynthesis*
  • Quorum Sensing
  • Sinorhizobium meliloti / genetics*
  • Sinorhizobium meliloti / metabolism*
  • Trans-Activators / genetics

Substances

  • Bacterial Proteins
  • Polysaccharides, Bacterial
  • Trans-Activators