Isolation and characterization of 21 microsatellite loci in Cardiocrinum giganteum var. yunnanense (Liliaceae), an important economic plant in China

Int J Mol Sci. 2012;13(2):1437-1443. doi: 10.3390/ijms13021437. Epub 2012 Jan 31.

Abstract

Twenty-one microsatellite markers from the genome of Cardiocrinum giganteum var. yunnanense, an important economic plant in China, were developed with a fast isolation protocol by amplified fragment length polymorphism of sequences containing repeats (FIASCO). Polymorphism within each locus was assessed in 24 wild individuals from Gaoligong Mountains in western Yunnan Province, China. The number of alleles per locus ranged from 2 to 4 with a mean of 2.9. The expected and observed levels of heterozygosity ranged from 0.042 to 0.726 and from 0.000 to 1.000, with averages of 0.44 and 0.31, respectively. These polymorphic microsatellite markers should prove useful in population genetics studies and assessments of genetic variation to develop conservation and management strategies for this species.

Keywords: Cardiocrinum giganteum var. yunnanense; Liliaceae; microsatellite markers; polymorphism; population genetics.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alleles*
  • China
  • Genetic Loci*
  • Liliaceae / genetics*
  • Microsatellite Repeats*
  • Polymorphism, Genetic*