Proteomic analysis by SILAC and 2D-DIGE reveals radiation-induced endothelial response: four key pathways

J Proteomics. 2012 Apr 18;75(8):2319-30. doi: 10.1016/j.jprot.2012.02.009. Epub 2012 Feb 20.

Abstract

Epidemiological data show that ionising radiation increases the risk of cardiovascular disease. The endothelium is one of the main targets of radiation-induced damage. Rapid radiation-induced alterations in the biological processes were investigated after exposure to a clinically relevant radiation dose (2.5 Gy gamma radiation). The changes in protein expression were determined using the human endothelial cell line EA.hy926 as a model. Two complementary proteomic approaches, SILAC (Stable Isotope Labelling with Amino acids in Cell culture) and 2D-DIGE (Two Dimensional Difference-in-Gel-Electrophoresis) were used. The proteomes of the endothelial cells were analysed 4h and 24h after irradiation. Differentially expressed proteins were identified and quantified by MALDI-TOF/TOF and LTQ Orbitrap tandem mass spectrometry. The deregulated proteins were mainly categorised in four key pathways: (i) glycolysis/gluconeogenesis and synthesis/degradation of ketone bodies, (ii) oxidative phosphorylation, (iii) Rho-mediated cell motility and (iv) non-homologous end joining. We suggest that these alterations facilitate the repair processes needed to overcome the stress caused by irradiation and are indicative of the vascular damage leading to radiation-induced cardio- and cerebrovascular impairment.

Publication types

  • Evaluation Study

MeSH terms

  • Amino Acids
  • Cell Culture Techniques
  • Cell Proliferation / radiation effects
  • Cells, Cultured
  • Endothelial Cells / chemistry*
  • Endothelial Cells / metabolism
  • Endothelial Cells / radiation effects*
  • Human Umbilical Vein Endothelial Cells / chemistry
  • Human Umbilical Vein Endothelial Cells / metabolism
  • Human Umbilical Vein Endothelial Cells / radiation effects
  • Humans
  • Isotope Labeling / methods*
  • Metabolic Networks and Pathways / physiology
  • Metabolic Networks and Pathways / radiation effects
  • Models, Biological
  • Proteome / analysis*
  • Proteome / metabolism
  • Proteomics / methods
  • Radiation Injuries / metabolism
  • Signal Transduction / radiation effects
  • Two-Dimensional Difference Gel Electrophoresis / methods*
  • Validation Studies as Topic

Substances

  • Amino Acids
  • Proteome