Molecular cloning and expression analysis of IFN-β promoter stimulator 1 in Tibetan pigs

Mol Biol Rep. 2012 Jun;39(6):7011-7. doi: 10.1007/s11033-012-1531-1. Epub 2012 Feb 9.

Abstract

IFN-β promoter stimulator 1 (IPS-1) is an important adaptor protein linking RIG-I/MDA5 to the downstream signaling molecules and plays the pivotal role in type I interferons induction. In this study, we cloned and characterized Tibetan porcine IPS-1, investigated the tissue distribution, compared different messenger RNA expression for IPS-1 between Tibetan and Crossbred (Duroc × Yorkshire × Landrace) pigs (DLY). The Tibetan porcine IPS-1 gene was first cloned from spleen. The entire open reading frame (ORF) of the IPS-1 is 1,575 bp and encodes for 524 amino acid residues, has 1 putative transmembrane domains, with a higher degree of sequence similarity with common pig (99.37%) and cattle (81.23%) than with human (70.20%) or mouse (63.44%). Real-time quantitative PCR analysis indicated that Tibetan porcine IPS-1 mRNA was most abundant in the liver and kidney. The expression of IPS-1 of Tibetan pigs in most tissues was higher than DLY pigs.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adaptor Proteins, Signal Transducing / genetics*
  • Adaptor Proteins, Signal Transducing / metabolism
  • Animals
  • Cloning, Molecular
  • Female
  • Intestine, Small / metabolism
  • Male
  • Molecular Sequence Data
  • Organ Specificity
  • Sequence Analysis, DNA
  • Sus scrofa / genetics*
  • Transcription, Genetic*

Substances

  • Adaptor Proteins, Signal Transducing

Associated data

  • GENBANK/JN644269