blaNDM-1 is a chimera likely constructed in Acinetobacter baumannii

Antimicrob Agents Chemother. 2012 May;56(5):2773-6. doi: 10.1128/AAC.06297-11. Epub 2012 Feb 6.

Abstract

Alignment of DNA sequences found upstream of aphA6 and all bla(NDM-1) genes displays 100% identity. This identity continues 19 bp into the bla(NDM-1) gene such that the first 6 amino acids of aphA6 and bla(NDM-1) are the same. Furthermore, the percent GC content (GC%) of aphA6 is considerably lower than that of bla(NDM-1) and the GC% within the bla(NDM-1) structural gene changes dramatically after the first 19 bp. This is unequivocal evidence that bla(NDM-1) is a chimera.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • 5' Flanking Region
  • Acinetobacter baumannii / genetics*
  • Anti-Bacterial Agents / pharmacology
  • Bacterial Proteins / genetics*
  • Base Composition
  • Base Sequence
  • Carbapenems / pharmacology
  • Humans
  • Molecular Sequence Data
  • Mutant Chimeric Proteins / genetics*
  • Open Reading Frames
  • Sequence Alignment
  • beta-Lactamases / genetics*

Substances

  • Anti-Bacterial Agents
  • Bacterial Proteins
  • Carbapenems
  • Mutant Chimeric Proteins
  • beta-Lactamases