Mutation identification of the DSPP in a Chinese family with DGI-II and an up-to-date bioinformatic analysis

Genomics. 2012 Apr;99(4):220-6. doi: 10.1016/j.ygeno.2012.01.006. Epub 2012 Jan 31.

Abstract

In this study, through linkage analysis of a four-generation Chinese family with multiple members afflicted with DGI (type II), we identified a novel missense mutation in DSPP. The mutation was located in exon 2 at the second nucleotide position of the last codon and resulted in a substitution of a proline with a leucine residue (c.50C>T, p.P17L, g.50C>T). To assess the potential effects of this novel mutation, we utilized various bioinformatics analysis programs. The results indicate that the mutation likely affects protein cleavage/trafficking. We also analyzed previously reported mutations of DSPP. In summary, our finding supports that the genomic sequence that corresponds to the P17 residue of DSPP is a mutational hotspot and P17 may be critical for the function of DSPP.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Asian People / genetics
  • China
  • Chromosomes, Human / genetics
  • Computational Biology / methods*
  • Dentinogenesis Imperfecta / genetics*
  • Exons
  • Extracellular Matrix Proteins / genetics*
  • Extracellular Matrix Proteins / metabolism
  • Female
  • Genetic Linkage
  • Genetic Predisposition to Disease
  • Haplotypes
  • Humans
  • Male
  • Mutation, Missense*
  • Pedigree
  • Phosphoproteins / genetics*
  • Phosphoproteins / metabolism
  • Sequence Analysis, DNA / methods
  • Sialoglycoproteins / genetics*
  • Sialoglycoproteins / metabolism

Substances

  • Extracellular Matrix Proteins
  • Phosphoproteins
  • Sialoglycoproteins
  • dentin sialophosphoprotein