Aptamer-regulated expression of essential genes in yeast

Methods Mol Biol. 2012:824:381-91. doi: 10.1007/978-1-61779-433-9_20.

Abstract

Conditional gene expression systems are important tools for the functional analysis of essential genes. Tetracycline (tc)-binding aptamers can be exploited as artificial riboswitches for the efficient control of gene expression by inserting them into the 5' untranslated region of an mRNA. The ligand-bound form of those mRNAs inhibits gene expression by interfering with translation initiation. In contrast to previous tc-dependent regulatory systems, where tc inhibits or activates transcription upon binding to the repressor protein TetR, the tc-binding aptamer system inhibits translation of the respective mRNA. We describe here a simple and powerful PCR-based strategy which allows easy tagging of any target gene in yeast using a tc aptamer-containing insertion cassette. The expression window can be adjusted with different promoters and protein synthesis is rapidly switched off.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aptamers, Nucleotide / genetics*
  • Aptamers, Nucleotide / metabolism
  • Blotting, Western / methods
  • Gene Expression Regulation, Fungal / genetics
  • Gene Expression Regulation, Fungal / physiology*
  • Genes, Essential / genetics*
  • Peptide Chain Initiation, Translational / genetics*
  • RNA, Messenger / genetics
  • RNA, Messenger / metabolism*
  • Riboswitch / genetics*
  • Tetracycline / metabolism*

Substances

  • Aptamers, Nucleotide
  • RNA, Messenger
  • Riboswitch
  • Tetracycline