3-heterocyclyl quinolone inhibitors of the HCV NS5B polymerase

Bioorg Med Chem Lett. 2012 Jan 1;22(1):300-4. doi: 10.1016/j.bmcl.2011.11.013. Epub 2011 Nov 9.

Abstract

The discovery and optimization of a novel class of quinolone small-molecules that inhibit NS5B polymerase, a key enzyme of the HCV viral life-cycle, is described. Our research led to the replacement of a hydrolytically labile ester functionality with bio-isosteric heterocycles. An X-ray crystal structure of a key analog bound to NS5B facilitated the optimization of this series of compounds to afford increased activity against the target enzyme and in the cell-based replicon assay system.

MeSH terms

  • Allosteric Site
  • Antiviral Agents / chemical synthesis
  • Antiviral Agents / pharmacology*
  • Binding Sites
  • Chemistry, Pharmaceutical / methods*
  • Crystallography, X-Ray / methods
  • Drug Design
  • Hepacivirus / enzymology*
  • Hydrogen Bonding
  • Hydrolysis
  • Inhibitory Concentration 50
  • Models, Chemical
  • Molecular Conformation
  • Quinolones / chemical synthesis
  • Quinolones / pharmacology*
  • Structure-Activity Relationship
  • Viral Nonstructural Proteins / antagonists & inhibitors*
  • Viral Nonstructural Proteins / chemistry
  • X-Rays

Substances

  • Antiviral Agents
  • Quinolones
  • Viral Nonstructural Proteins
  • NS-5 protein, hepatitis C virus