Engineering of bacterial methyl ketone synthesis for biofuels

Appl Environ Microbiol. 2012 Jan;78(1):70-80. doi: 10.1128/AEM.06785-11. Epub 2011 Oct 28.

Abstract

We have engineered Escherichia coli to overproduce saturated and monounsaturated aliphatic methyl ketones in the C₁₁ to C₁₅ (diesel) range; this group of methyl ketones includes 2-undecanone and 2-tridecanone, which are of importance to the flavor and fragrance industry and also have favorable cetane numbers (as we report here). We describe specific improvements that resulted in a 700-fold enhancement in methyl ketone titer relative to that of a fatty acid-overproducing E. coli strain, including the following: (i) overproduction of β-ketoacyl coenzyme A (CoA) thioesters achieved by modification of the β-oxidation pathway (specifically, overexpression of a heterologous acyl-CoA oxidase and native FadB and chromosomal deletion of fadA) and (ii) overexpression of a native thioesterase (FadM). FadM was previously associated with oleic acid degradation, not methyl ketone synthesis, but outperformed a recently identified methyl ketone synthase (Solanum habrochaites MKS2 [ShMKS2], a thioesterase from wild tomato) in β-ketoacyl-CoA-overproducing strains tested. Whole-genome transcriptional (microarray) studies led to the discovery that FadM is a valuable catalyst for enhancing methyl ketone production. The use of a two-phase system with decane enhanced methyl ketone production by 4- to 7-fold in addition to increases from genetic modifications.

Publication types

  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Acyl Coenzyme A / metabolism
  • Biofuels*
  • Chromatography, Liquid
  • Coenzyme A Ligases / metabolism
  • Escherichia coli / genetics
  • Escherichia coli / metabolism*
  • Escherichia coli Proteins / metabolism
  • Gas Chromatography-Mass Spectrometry
  • Ketones / isolation & purification
  • Ketones / metabolism*
  • Metabolic Engineering / methods*
  • Oligonucleotide Array Sequence Analysis
  • RNA, Bacterial / analysis
  • Reverse Transcriptase Polymerase Chain Reaction
  • Thiolester Hydrolases / metabolism

Substances

  • Acyl Coenzyme A
  • Biofuels
  • Escherichia coli Proteins
  • Ketones
  • RNA, Bacterial
  • 2-tridecanone
  • FadM protein, E coli
  • Thiolester Hydrolases
  • Coenzyme A Ligases
  • acyl-coenzyme A synthetase, E coli
  • undecan-2-one

Associated data

  • GEO/GPL14649