Bacterial and eukaryotic phenylalanyl-tRNA synthetases catalyze misaminoacylation of tRNA(Phe) with 3,4-dihydroxy-L-phenylalanine

Chem Biol. 2011 Oct 28;18(10):1221-9. doi: 10.1016/j.chembiol.2011.08.008.

Abstract

Aminoacyl-tRNA synthetases exert control over the accuracy of translation by selective pairing the correct amino acids with their cognate tRNAs, and proofreading the misacylated products. Here we show that three existing, structurally different phenylalanyl-tRNA synthetases-human mitochondrial (HsmtPheRS), human cytoplasmic (HsctPheRS), and eubacterial from Thermus thermophilus (TtPheRS), catalyze mischarging of tRNA(Phe) with an oxidized analog of tyrosine-L-dopa. The lowest level of L-dopa discrimination over the cognate amino acid, exhibited by HsmtPheRS, is comparable to that of tyrosyl-tRNA synthetase. HsmtPheRS and TtPheRS complexes with L-dopa revealed in the active sites an electron density shaping this ligand. HsctPheRS and TtPheRS possessing editing activity are capable of hydrolyzing the exogenous L-dopa-tRNA(Phe) as efficiently as Tyr-tRNA(Phe). However, editing activity of PheRS does not guarantee reduction of the aminoacylation error rate to escape misincorporation of L-dopa into polypeptide chains.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Catalytic Domain
  • Cytoplasm / enzymology
  • Eukaryota / enzymology*
  • Humans
  • Levodopa / metabolism*
  • Mitochondria / enzymology
  • Phenylalanine-tRNA Ligase / chemistry*
  • Phenylalanine-tRNA Ligase / metabolism*
  • Protein Conformation
  • RNA Editing
  • RNA, Transfer, Amino Acyl / metabolism*
  • Thermus thermophilus / enzymology*
  • Tyrosine / analogs & derivatives

Substances

  • RNA, Transfer, Amino Acyl
  • Tyrosine
  • Levodopa
  • Phenylalanine-tRNA Ligase

Associated data

  • PDB/3TEG
  • PDB/3TEH