A space-time conditional intensity model for invasive meningococcal disease occurrence

Biometrics. 2012 Jun;68(2):607-16. doi: 10.1111/j.1541-0420.2011.01684.x. Epub 2011 Oct 9.

Abstract

A novel point process model continuous in space-time is proposed for quantifying the transmission dynamics of the two most common meningococcal antigenic sequence types observed in Germany 2002-2008. Modeling is based on the conditional intensity function (CIF), which is described by a superposition of additive and multiplicative components. As an epidemiological interesting finding, spread behavior was shown to depend on type in addition to age: basic reproduction numbers were 0.25 (95% CI 0.19-0.34) and 0.11 (95% CI 0.07-0.17) for types B:P1.7-2,4:F1-5 and C:P1.5,2:F3-3, respectively. Altogether, the proposed methodology represents a comprehensive and universal regression framework for the modeling, simulation, and inference of self-exciting spatiotemporal point processes based on the CIF. Usability of the modeling in biometric practice is promoted by an implementation in the R package surveillance.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Algorithms
  • Antigens, Bacterial / genetics
  • Biometry / methods*
  • Computer Simulation
  • Data Interpretation, Statistical
  • Epidemics / statistics & numerical data
  • Germany / epidemiology
  • Humans
  • Incidence
  • Meningococcal Infections / epidemiology*
  • Meningococcal Infections / microbiology
  • Meningococcal Infections / transmission
  • Models, Statistical*
  • Neisseria meningitidis / classification
  • Neisseria meningitidis / genetics
  • Neisseria meningitidis / immunology
  • Stochastic Processes

Substances

  • Antigens, Bacterial