Differential degradation of bicyclics with aromatic and alicyclic rings by Rhodococcus sp. strain DK17

Appl Environ Microbiol. 2011 Dec;77(23):8280-7. doi: 10.1128/AEM.06359-11. Epub 2011 Sep 30.

Abstract

The metabolically versatile Rhodococcus sp. strain DK17 is able to grow on tetralin and indan but cannot use their respective desaturated counterparts, 1,2-dihydronaphthalene and indene, as sole carbon and energy sources. Metabolite analyses by gas chromatography-mass spectrometry and nuclear magnetic resonance spectrometry clearly show that (i) the meta-cleavage dioxygenase mutant strain DK180 accumulates 5,6,7,8-tetrahydro-1,2-naphthalene diol, 1,2-indene diol, and 3,4-dihydro-naphthalene-1,2-diol from tetralin, indene, and 1,2-dihydronaphthalene, respectively, and (ii) when expressed in Escherichia coli, the DK17 o-xylene dioxygenase transforms tetralin, indene, and 1,2-dihydronaphthalene into tetralin cis-dihydrodiol, indan-1,2-diol, and cis-1,2-dihydroxy-1,2,3,4-tetrahydronaphthalene, respectively. Tetralin, which is activated by aromatic hydroxylation, is degraded successfully via the ring cleavage pathway to support growth of DK17. Indene and 1,2-dihydronaphthalene do not serve as growth substrates because DK17 hydroxylates them on the alicyclic ring and further metabolism results in a dead-end metabolite. This study reveals that aromatic hydroxylation is a prerequisite for proper degradation of bicyclics with aromatic and alicyclic rings by DK17 and confirms the unique ability of the DK17 o-xylene dioxygenase to perform distinct regioselective hydroxylations.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bridged Bicyclo Compounds, Heterocyclic / metabolism*
  • Cloning, Molecular
  • Escherichia coli / genetics
  • Escherichia coli / metabolism
  • Gas Chromatography-Mass Spectrometry
  • Gene Expression
  • Hydrocarbons, Alicyclic / metabolism*
  • Magnetic Resonance Spectroscopy
  • Polycyclic Aromatic Hydrocarbons / metabolism*
  • Rhodococcus / chemistry
  • Rhodococcus / enzymology
  • Rhodococcus / genetics
  • Rhodococcus / metabolism*

Substances

  • Bridged Bicyclo Compounds, Heterocyclic
  • Hydrocarbons, Alicyclic
  • Polycyclic Aromatic Hydrocarbons