A pot experiment with red soil, yellow brown soil, and yellow cinnamon soil was conducted to detect the Bt protein content in rhizosphere and non-rhizosphere soils at different growth stages of transgenic Bt cotton and common cotton by using enzyme linked immunosorbent assay (ELISA). With the planting of transgenic Bt cotton, the Bt protein content in rhizosphere soil was significantly higher than that in non-rhizosphere soil; while in common cotton soils, there was no significant difference in the Bt protein content between rhizosphere soil and non-rhizosphere soil. At bud stage of transgenic Bt cotton, the Bt protein content in rhizosphere soil was in the order of yellow cinnamon soil > yellow brown soil > red soil, being 144% 121%, and 238% of that in common cotton rhizosphere soil; at florescence stage of transgenic Bt cotton, the Bt protein content in rhizosphere soil was in the order of yellow brown soil > yellow cinnamon soil > red soil, being 156% , 116% , and 197% of that in common cotton rhizosphere soil, respectively. Regardless of planting Bt cotton or common cotton, the Bt protein content in rhizosphere and non-rhizosphere soils had an initial increase with the growth of cotton, peaked at florescence stage, and then decreased. Throughout the whole cotton growth period, the Bt protein content in transgenic Bt cotton rhizosphere soil was higher than that in Bt cotton non-rhizosphere soil, and also, higher than that in common cotton rhizosphere soil, indicating that transgenic Bt cotton could release its Bt protein to rhizosphere soil.