Direction-dependent mechanical unfolding and green fluorescent protein as a force sensor

Phys Rev E Stat Nonlin Soft Matter Phys. 2011 Aug;84(2 Pt 1):021918. doi: 10.1103/PhysRevE.84.021918. Epub 2011 Aug 11.

Abstract

An Ising-like model of proteins is used to investigate the mechanical unfolding of the green fluorescent protein along different directions. When the protein is pulled from its ends, we recover the major and minor unfolding pathways observed in experiments. Upon varying the pulling direction, we find the correct order of magnitude and ranking of the unfolding forces. Exploiting the direction dependence of the unfolding force at equilibrium, we propose a force sensor whose luminescence depends on the applied force.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Biomechanical Phenomena
  • Green Fluorescent Proteins / chemistry*
  • Mechanical Phenomena*
  • Models, Molecular*
  • Protein Conformation
  • Protein Unfolding*

Substances

  • Green Fluorescent Proteins