Discrimination of neutral oligosaccharides through a nanopore

Biochem Biophys Res Commun. 2011 Sep 9;412(4):561-4. doi: 10.1016/j.bbrc.2011.07.121. Epub 2011 Aug 4.

Abstract

The detection of oligosaccharides at the single-molecule level was investigated using a protein nanopore device. Neutral oligosaccharides of various molecular weights were translocated through a single α-hemolysin nanopore and their nano-transit recorded at the single-molecule level. The translocation of maltose and dextran oligosaccharides featured by 1→4 and 1→6 glycosidic bonds respectively was studied in an attempt to discriminate oligosaccharides according to their polymerization degree and glycosidic linkages. Oligosaccharides were translocated through a free diffusion regime indicating that they adopted an extended conformation during their translocation in the nanopore. The dwell time increased with molecular mass, suggesting the usefulness of nanopore as a molecular sizing device.

MeSH terms

  • Bacterial Toxins / chemistry*
  • Dextrans / analysis
  • Hemolysin Proteins / chemistry*
  • Hydrogen-Ion Concentration
  • Lipid Bilayers / chemistry*
  • Maltose / analysis
  • Nanopores*
  • Oligosaccharides / analysis*

Substances

  • Bacterial Toxins
  • Dextrans
  • Hemolysin Proteins
  • Lipid Bilayers
  • Oligosaccharides
  • staphylococcal alpha-toxin
  • Maltose