General and modular synthesis of isomeric 5-substituted pyridin-2-yl and 6-substituted pyridin-3-yl C-ribonucleosides bearing diverse alkyl, aryl, hetaryl, amino, carbamoyl, and hydroxy groups

J Org Chem. 2011 Aug 19;76(16):6619-35. doi: 10.1021/jo200949c. Epub 2011 Jul 25.

Abstract

A general modular and practical methodology for preparation of diverse 5-substituted pyridin-2-yl and 6-substituted pyridin-3-yl C-ribonucleosides was developed. Regioselective lithiation of 2,5-dibromopyridine proceeded at position 5 or 2 depending on the solvent, and the resulting bromopyridyl lithium species underwent additions to TBS-protected ribonolactone and follow-up transformations to corresponding acetylated hemiketal intermediates 7 and 10 that were diastereoselectively reduced to give either 5-bromopyridin-2-yl or 6-bromopyridin-3-yl silyl-protected C-ribonucleosides 8 or 11 in 68% and 77% overall yields as pure β-anomers. These bromopyridyl C-nucleoside intermediates were then subjected to a series of palladium-catalyzed cross-coupling reactions, aminations, aminocarbonylations, and hydroxylations to give a series of protected 1β-(5-alkyl-, 5-aryl-, 5-amino-, 5-carbamoyl-, and 5-hydroxypyridin-2-yl)-C-ribonucleosides 13a-i and β-(6-alkyl-, 6-aryl-, 6-amino-, 6-carbamoyl-, and 6-hydroxypyridin-3-yl)-C-ribonucleosides 15a-i. Deprotection of silylated nucleosides by Et(3)N·3HF, TBAF, or TFA gave a series of free C-nucleosides 14a-i and 16a-i.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alkanes / chemistry*
  • Amination
  • Carbamates / chemistry*
  • Catalysis
  • Cross-Linking Reagents / chemistry
  • Heterocyclic Compounds / chemistry*
  • Isomerism
  • Magnetic Resonance Spectroscopy
  • Molecular Structure
  • Palladium / chemistry*
  • Pyridines / chemical synthesis*
  • Pyridines / chemistry
  • Ribonucleosides / chemical synthesis*
  • Ribonucleosides / chemistry
  • Stereoisomerism

Substances

  • Alkanes
  • Carbamates
  • Cross-Linking Reagents
  • Heterocyclic Compounds
  • Pyridines
  • Ribonucleosides
  • Palladium