Allele and haplotype diversity of X-chromosomal STRs in Ivory Coast

Int J Legal Med. 2011 Sep;125(5):749-52. doi: 10.1007/s00414-011-0591-4. Epub 2011 Jun 30.

Abstract

Twenty-one X-chromosomal short tandem repeat (STR) loci, including the six clusters of linked markers DXS10148-DXS10135-DXS8378 (Xp22), DXS7132-DXS10079-DXS10074 (Xq12), DXS6801-DXS6809-DXS6789 (Xq21), DXS7424-DXS101 (Xq22), DXS10103-HPRTB-DXS10101 (Xq26), DXS8377-DXS10146-DXS10134-DXS7423 (Xq28) and the loci DXS6800, GATA172D05 and DXS10011 were typed in a population sample from Ivory Coast (n=125; 51 men and 74 women). Allele and haplotype frequencies as well as linkage disequilibrium data for kinship calculations are provided. On the whole, no significant differences in the genetic variability of X-STR markers were observed between Ivorians and other sub-Saharan African populations belonging to the Niger-Kordofanian linguistic group.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Chromosomes, Human, X / genetics*
  • Cote d'Ivoire
  • Female
  • Gene Frequency*
  • Gene Pool
  • Genetic Carrier Screening
  • Genetic Loci / genetics
  • Genetic Variation / genetics*
  • Genetics, Population*
  • Haplotypes / genetics*
  • Humans
  • Linkage Disequilibrium / genetics
  • Male
  • Microsatellite Repeats / genetics*
  • Paternity
  • Polymorphism, Genetic / genetics