Five phosphonate operon gene products as components of a multi-subunit complex of the carbon-phosphorus lyase pathway

Proc Natl Acad Sci U S A. 2011 Jul 12;108(28):11393-8. doi: 10.1073/pnas.1104922108. Epub 2011 Jun 24.

Abstract

Organophosphonate utilization by Escherichia coli requires the 14 cistrons of the phnCDEFGHIJKLMNOP operon, of which the carbon-phosphorus lyase has been postulated to consist of the seven polypeptides specified by phnG to phnM. A 5,660-bp DNA fragment encompassing phnGHIJKLM is cloned, followed by expression in E. coli and purification of Phn-polypeptides. PhnG, PhnH, PhnI, PhnJ, and PhnK copurify as a protein complex by ion-exchange, size-exclusion, and affinity chromatography. The five polypeptides also comigrate in native-PAGE. Cross-linking of the purified protein complex reveals a close proximity of PhnG, PhnI, PhnJ, and PhnK, as these subunits disappear concomitant with the formation of large cross-linked protein complexes. Two molecular forms are identified, a major form of molecular mass of approximately 260 kDa, a minor form of approximately 640 kDa. The stoichiometry of the protein complex is suggested to be PhnG(4)H(2)I(2)J(2)K. Deletion of individual phn genes reveals that a strain harboring plasmid-borne phnGHIJ produces a protein complex consisting of PhnG, PhnH, PhnI, and PhnJ, whereas a strain harboring plasmid-borne phnGIJK produces a protein complex consisting of PhnG and PhnI. We conclude that phnGHIJK specify a soluble multisubunit protein complex essential for organophosphonate utilization.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Sequence
  • Cloning, Molecular
  • DNA, Bacterial / genetics
  • Escherichia coli / genetics*
  • Escherichia coli / metabolism*
  • Genes
  • Genes, Bacterial
  • Lyases / chemistry
  • Lyases / genetics*
  • Lyases / metabolism*
  • Metabolic Networks and Pathways
  • Models, Biological
  • Molecular Weight
  • Multienzyme Complexes / chemistry
  • Multienzyme Complexes / genetics
  • Multienzyme Complexes / metabolism
  • Operon
  • Organophosphonates / metabolism*
  • Protein Subunits
  • Regulon
  • Sequence Deletion

Substances

  • DNA, Bacterial
  • Multienzyme Complexes
  • Organophosphonates
  • Protein Subunits
  • Lyases
  • carbon-phosphorus lyase