Genetic characterization of human T-cell lymphotropic virus type 1 in Mozambique: transcontinental lineages drive the HTLV-1 endemic

PLoS Negl Trop Dis. 2011 Apr 12;5(4):e1038. doi: 10.1371/journal.pntd.0001038.

Abstract

Background: Human T-Cell Lymphotropic Virus Type 1 (HTLV-1) is the etiological agent of adult T-cell leukemia (ATL) and HTLV-1-associated myelopathy/tropical spastic paraparesis (HAM/TSP). It has been estimated that 10-20 million people are infected worldwide, but no successful treatment is available. Recently, the epidemiology of this virus was addressed in blood donors from Maputo, showing rates from 0.9 to 1.2%. However, the origin and impact of HTLV endemic in this population is unknown.

Objective: To assess the HTLV-1 molecular epidemiology in Mozambique and to investigate their relationship with HTLV-1 lineages circulating worldwide.

Methods: Blood donors and HIV patients were screened for HTLV antibodies by using enzyme immunoassay, followed by Western Blot. PCR and sequencing of HTLV-1 LTR region were applied and genetic HTLV-1 subtypes were assigned by the neighbor-joining method. The mean genetic distance of Mozambican HTLV-1 lineages among the genetic clusters were determined. Human mitochondrial (mt) DNA analysis was performed and individuals classified in mtDNA haplogroups.

Results: LTR HTLV-1 analysis demonstrated that all isolates belong to the Transcontinental subgroup of the Cosmopolitan subtype. Mozambican HTLV-1 sequences had a high inter-strain genetic distance, reflecting in three major clusters. One cluster is associated with the South Africa sequences, one is related with Middle East and India strains and the third is a specific Mozambican cluster. Interestingly, 83.3% of HIV/HTLV-1 co-infection was observed in the Mozambican cluster. The human mtDNA haplotypes revealed that all belong to the African macrohaplogroup L with frequencies representatives of the country.

Conclusions: The Mozambican HTLV-1 genetic diversity detected in this study reveals that although the strains belong to the most prevalent and worldwide distributed Transcontinental subgroup of the Cosmopolitan subtype, there is a high HTLV diversity that could be correlated with at least 3 different HTLV-1 introductions in the country. The significant rate of HTLV-1a/HIV-1C co-infection, particularly in the Mozambican cluster, has important implications for the controls programs of both viruses.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Blood Donors
  • Blotting, Western
  • Cluster Analysis
  • Genotype
  • HIV Infections / complications
  • HTLV-I Infections / epidemiology*
  • HTLV-I Infections / virology*
  • Human T-lymphotropic virus 1 / classification*
  • Human T-lymphotropic virus 1 / genetics*
  • Human T-lymphotropic virus 1 / isolation & purification
  • Humans
  • Immunoenzyme Techniques
  • Molecular Epidemiology
  • Molecular Sequence Data
  • Mozambique / epidemiology
  • Phylogeny
  • Polymerase Chain Reaction
  • RNA, Viral / genetics
  • Sequence Analysis, DNA

Substances

  • RNA, Viral

Associated data

  • GENBANK/GU194504
  • GENBANK/GU194505
  • GENBANK/GU194506
  • GENBANK/GU194507
  • GENBANK/GU194508
  • GENBANK/GU194509
  • GENBANK/GU194510
  • GENBANK/GU194511
  • GENBANK/GU194512
  • GENBANK/GU194513
  • GENBANK/GU194514
  • GENBANK/GU194515
  • GENBANK/GU194516
  • GENBANK/GU194517
  • GENBANK/GU194518
  • GENBANK/GU194519
  • GENBANK/GU194520
  • GENBANK/GU194521
  • GENBANK/GU194522
  • GENBANK/GU194523
  • GENBANK/GU194524
  • GENBANK/GU194525
  • GENBANK/GU194526
  • GENBANK/GU194527
  • GENBANK/GU194528