Miniaturized queens, microgynes, are regarded as an alternative reproductive strategy sparsely present through the ant world. The described roles of miniaturized queens include alternative short-distance dispersal morphs, an adaptation to polygyny and inquiline parasites. Some of these inquiline parasite microgynes have been described as a separate species from their host. In the poneromorph group, miniaturized queens are only reported in two Mexican populations of two Ectatomminae: Ectatomma tuberculatum, in which small queens represent an inquiline species (Ectatomma parasiticum) and Ectatomma ruidum. E. ruidum presents apparently facultative polygyny with microgynes. We used mitochondrial DNA markers and newly developed microsatellite loci to investigate the status as well as the role of microgynes in E. ruidum. We confirmed that microgynes and macrogynes are from the same species. This species is almost exclusively monogynous and monoandrous, supernumerary dealate queens of both types being actually daughters of the mother queen. An apparently polygynous nest was more often headed by a macrogyne than a microgyne. We didn't find any inbreeding or isolation by distance in the studied population, indicating that new gynes are inseminated by unrelated males and can establish a new nest far from their natal nest. However, re-adoption of daughter queens seems to be the rule and rate of microgyny appears to be linked to nest density and environmental factors.