Rapid and enhanced proteolytic digestion using electric-field-oriented enzyme reactor

J Proteomics. 2011 Jun 10;74(7):1030-5. doi: 10.1016/j.jprot.2011.02.007. Epub 2011 Feb 19.

Abstract

We have created a novel enzyme reactor using electric field-mediated orientation and immobilization of proteolytic enzymes (trypsin/chymotrypsin) on biocompatible PVDF membranes in a continuous flow-through chamber. Using less than 5min, this reactor in various enzyme combinations can produce enhanced rapid digestion for standardized prototypic proteins, hydrophilic proteins and hydrophobic transmembrane proteins when compared to in-solution techniques. With improved digestive efficiency, our reactor improved the overall functional analysis of lipid raft proteomes by identifying more closely functionally linked proteins and elucidated a richer set of biological processes and pathways linked to the proteins than traditional in-solution methods.

Publication types

  • Research Support, N.I.H., Intramural

MeSH terms

  • Bioreactors*
  • Chymotrypsin / metabolism
  • Electricity
  • Enzymes, Immobilized / metabolism*
  • Hydrolysis
  • Membrane Microdomains / metabolism
  • Membranes, Artificial
  • Polyvinyls
  • Proteins / metabolism
  • Proteomics / methods*
  • Trypsin / metabolism

Substances

  • Enzymes, Immobilized
  • Membranes, Artificial
  • Polyvinyls
  • Proteins
  • polyvinylidene fluoride
  • Chymotrypsin
  • Trypsin