A Tat-grafted anti-nucleic acid antibody acquires nuclear-localization property and a preference for TAR RNA

Biochem Biophys Res Commun. 2011 Mar 18;406(3):403-7. doi: 10.1016/j.bbrc.2011.02.054. Epub 2011 Feb 15.

Abstract

The 3D8 single chain variable fragment (3D8 scFv) is an anti-nucleic acid antibody that can hydrolyze nucleic acids and enter the cytosol of cells without reaching the nucleus. The Tat peptide, derived from the basic region of the HIV-1 Tat protein, translocates to cell nuclei and has TAR RNA binding activity. In this study, we generated a Tat-grafted antibody ((H₃)Tat-3D8) by replacing complementarity-determining region 3 (CDR3) within the VH domain of the 3D8 scFv with a Tat₄₈₋₆₀ peptide (GRKKRRQRRRPPQ). (H₃)Tat-3D8 retained the DNA-binding and DNA-hydrolyzing activity of the scFv, and translocated to the nuclei of HeLa cells and preferentially recognized TAR RNA. Thus, the properties associated with the Tat peptide were transferred to the antibody via Tat-grafting without loss of the intrinsic DNA-binding and hydrolyzing activities of the 3D8 scFv antibody.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Antibodies, Antinuclear / immunology*
  • Antibodies, Antinuclear / metabolism
  • Base Sequence
  • Cell Nucleus / immunology*
  • Cell Nucleus / metabolism
  • DNA / immunology
  • HIV-1*
  • HeLa Cells
  • Humans
  • Hydrolysis
  • Molecular Sequence Data
  • Protein Structure, Tertiary
  • RNA, Viral / immunology*
  • RNA, Viral / metabolism
  • RNA-Binding Proteins / immunology*
  • RNA-Binding Proteins / metabolism
  • Single-Chain Antibodies / immunology
  • Single-Chain Antibodies / metabolism

Substances

  • Antibodies, Antinuclear
  • RNA, Viral
  • RNA-Binding Proteins
  • Single-Chain Antibodies
  • trans-activation responsive RNA-binding protein
  • DNA