The structure of a haemopexin-fold protein from cow pea (Vigna unguiculata) suggests functional diversity of haemopexins in plants

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2011 Feb 1;67(Pt 2):193-200. doi: 10.1107/S1744309110051250. Epub 2011 Jan 21.

Abstract

The haemopexin fold is present in almost all life forms and is utilized for carrying out diverse physiological functions. The structure of CP4, a haemopexin-fold protein from cow pea (Vigna unguiculata), was determined at 2.1 Å resolution. The protein exists as a monomer both in solution and in the crystal. The structure revealed a typical four-bladed β-propeller topology. The protein exhibits 42% sequence similarity to LS-24 from Lathyrus sativus, with substantial differences in the surface-charge distribution and in the oligomeric state. A structure-based sequence analysis of haemopexin-fold proteins of plant and mammalian origin established a sequence signature associated with the haemopexin motif. This signature sequence enabled the identification of other proteins with possible haemopexin-like topology of both plant and animal origin. Although CP4 shares a structural fold with LS-24 and other haemopexins, biochemical studies indicated possible functional differences between CP4 and LS-24. While both of these proteins exhibit spermine-binding potential, CP4 does not bind to haem, unlike LS-24.

Publication types

  • Comparative Study

MeSH terms

  • Amino Acid Motifs
  • Amino Acid Sequence
  • Base Sequence
  • Calibration
  • Conserved Sequence
  • Crystallization
  • Crystallography, X-Ray / methods
  • Dimerization
  • Fabaceae / metabolism*
  • Heme / metabolism
  • Hemopexin / chemistry*
  • Hemopexin / metabolism
  • Hydrolysis
  • Hydrophobic and Hydrophilic Interactions
  • Lathyrus / metabolism
  • Macromolecular Substances / chemistry
  • Macromolecular Substances / metabolism
  • Models, Molecular
  • Molecular Sequence Data
  • Molecular Weight
  • Pisum sativum / metabolism*
  • Plant Proteins / chemistry*
  • Plant Proteins / isolation & purification
  • Plant Proteins / metabolism
  • Plants / metabolism*
  • Protein Structure, Secondary
  • Protein Structure, Tertiary
  • Protein Subunits / chemistry
  • Proteome / analysis
  • Reference Standards
  • Seeds / chemistry
  • Sequence Analysis, Protein
  • Sequence Homology, Amino Acid
  • Spermine / metabolism

Substances

  • Macromolecular Substances
  • Plant Proteins
  • Protein Subunits
  • Proteome
  • Spermine
  • Heme
  • Hemopexin

Associated data

  • PDB/3OYO