A modular microfluidic system for deoxyribonucleic acid identification by short tandem repeat analysis

Anal Chim Acta. 2011 Feb 21;687(2):150-8. doi: 10.1016/j.aca.2010.12.016. Epub 2010 Dec 16.

Abstract

Microfluidic technology has been utilized in the development of a modular system for DNA identification through STR (short tandem repeat) analysis, reducing the total analysis time from the ∼6 h required with conventional approaches to less than 3h. Results demonstrate the utilization of microfluidic devices for the purification, amplification, separation and detection of 9 loci associated with a commercially-available miniSTR amplification kit commonly used in the forensic community. First, DNA from buccal swabs purified in a microdevice was proven amplifiable for the 9 miniSTR loci via infrared (IR)-mediated PCR (polymerase chain reaction) on a microdevice. Microchip electrophoresis (ME) was then demonstrated as an effective method for the separation and detection of the chip-purified and chip-amplified DNA with results equivalent to those obtained using conventional separation methods on an ABI 310 Genetic Analyzer. The 3-chip system presented here demonstrates development of a modular, microfluidic system for STR analysis, allowing for user-discretion as to how to proceed after each process during the analysis of forensic casework samples.

MeSH terms

  • DNA / analysis*
  • Electrophoresis, Microchip / instrumentation*
  • Forensic Medicine / methods
  • Identification, Psychological
  • Lab-On-A-Chip Devices
  • Microfluidic Analytical Techniques / instrumentation*
  • Microfluidics / methods
  • Microsatellite Repeats / genetics*
  • Polymerase Chain Reaction / instrumentation*
  • Quantitative Trait Loci
  • Solid Phase Extraction / methods*

Substances

  • DNA