Studies on substrate specificity of Jmjd2a-c histone demethylases

Biochem Biophys Res Commun. 2011 Feb 25;405(4):588-92. doi: 10.1016/j.bbrc.2011.01.073. Epub 2011 Jan 23.

Abstract

Jumonji domain containing iron (II), 2-oxoglutarate (2OG)-dependent dioxygenases from Jmjd2 family demethylate trimethylated histone3-lysine 9 (H3-K9me3), and also H3-K9me2 and H3-K36me3, albeit at lower rates. Recently, we have identified the first non-histone substrates of JmjD2 demethylases. Here, we studied the substrate specificity of Jmjd2a-c demethylases using site-directed mutagenesis and novel non-histone substrates. We identified preference of Arg at -1 position and a smaller amino acid at -2 position using both singly and doubly mutated peptide substrates by Jmjd2a-c demethylases. Our results also identified similarities in substrate selectivity by H3-K9 methyltransferase, G9a and Jmjd2 demethylases despite their distinct reaction mechanisms.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Arginine / chemistry
  • Arginine / genetics
  • Cloning, Molecular
  • Humans
  • Jumonji Domain-Containing Histone Demethylases / chemistry*
  • Jumonji Domain-Containing Histone Demethylases / genetics
  • Mutagenesis, Site-Directed
  • Substrate Specificity

Substances

  • KDM4C protein, human
  • Arginine
  • Jumonji Domain-Containing Histone Demethylases
  • KDM4B protein, human
  • KDM4A protein, human