The purpose of this investigation was to remove the organic nitrogen compounds from petroleum-derived diesel fuels. These nitrogen compounds can cause environmental problems, as well as fuel instability problems that can degrade fuels and affect engine performance. Fuels were treated with two different filtering media, activated clay and silica tel. The methylene chloride extracts from both the activated clay and silica gel were subjected to GC/MS analysis. Close to 99% of the total organic nitrogen compounds were removed. About 60% of the nitrogen compounds identified consisted of pyridines, quinolines and tetra-hydroquinolines made up 26%, while indoles and carbazoles about 10% of the total nitrogen compounds. Of the nitrogen heterocyclics identified, indoles and carbazoles were linked to fuel instability reactions. The proposed method was tested on diesels fuels from a variety of countries and found to remove between 97.8 and 99.9% of the N-compounds. The results of this study showed that both of these filtering materials were effective in removing the organic nitrogen compounds and resulted in fuels that exhibited excellent storage stability. These simple filtering methods can be independent of the refining process and do result in an environmentally cleaner burning fuel.