TIA1 prevents skipping of a critical exon associated with spinal muscular atrophy

Mol Cell Biol. 2011 Mar;31(5):935-54. doi: 10.1128/MCB.00945-10. Epub 2010 Dec 28.

Abstract

Prevention of skipping of exon 7 during pre-mRNA splicing of Survival Motor Neuron 2 (SMN2) holds the promise for cure of spinal muscular atrophy (SMA), a leading genetic cause of infant mortality. Here, we report T-cell-restricted intracellular antigen 1 (TIA1) and TIA1-related (TIAR) proteins as intron-associated positive regulators of SMN2 exon 7 splicing. We show that TIA1/TIAR stimulate exon recognition in an entirely novel context in which intronic U-rich motifs are separated from the 5' splice site by overlapping inhibitory elements. TIA1 and TIAR are modular proteins with three N-terminal RNA recognition motifs (RRMs) and a C-terminal glutamine-rich (Q-rich) domain. Our results reveal that any one RRM in combination with a Q domain is necessary and sufficient for TIA1-associated regulation of SMN2 exon 7 splicing in vivo. We also show that increased expression of TIA1 counteracts the inhibitory effect of polypyrimidine tract binding protein, a ubiquitously expressed factor recently implicated in regulation of SMN exon 7 splicing. Our findings expand the scope of TIA1/TIAR in genome-wide regulation of alternative splicing under normal and pathological conditions.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alternative Splicing*
  • Cell Line
  • Exons*
  • Humans
  • Introns
  • Muscular Atrophy, Spinal / genetics*
  • Poly(A)-Binding Proteins / genetics
  • Poly(A)-Binding Proteins / metabolism*
  • Polypyrimidine Tract-Binding Protein / antagonists & inhibitors
  • RNA-Binding Proteins / genetics
  • RNA-Binding Proteins / metabolism*
  • Survival of Motor Neuron 2 Protein / genetics
  • Survival of Motor Neuron 2 Protein / metabolism
  • T-Cell Intracellular Antigen-1

Substances

  • Poly(A)-Binding Proteins
  • RNA-Binding Proteins
  • SMN2 protein, human
  • Survival of Motor Neuron 2 Protein
  • T-Cell Intracellular Antigen-1
  • TIA1 protein, human
  • Polypyrimidine Tract-Binding Protein
  • TIAL1 protein, human