Screening for epigenetic target genes that enhance reprogramming using lentiviral-delivered shRNA

Methods Mol Biol. 2011:702:299-316. doi: 10.1007/978-1-61737-960-4_22.

Abstract

Small molecules will need to be identified and/or developed that target protein classes limiting reprogramming efficiency. A specific class of proteins includes epigenetic regulators that silence, or minimize expression, of pluripotency genes in differentiated cells. To better understand the role of specific epigenetic modulators in reprogramming, we have used shRNA delivered by lentivirus to assess the significance of individual epi-proteins in reprogramming pluripotent gene expression.

MeSH terms

  • Adipocytes / cytology
  • Adipocytes / metabolism
  • Cells, Cultured
  • Cellular Reprogramming / genetics*
  • Colony-Forming Units Assay
  • DNA, Complementary / biosynthesis
  • Dermis / cytology
  • Embryonic Stem Cells / cytology
  • Embryonic Stem Cells / metabolism
  • Epigenesis, Genetic*
  • Fibroblasts / cytology
  • Fibroblasts / metabolism
  • Gene Transfer Techniques*
  • Genes, Reporter
  • Genetic Testing / methods*
  • Humans
  • Immunohistochemistry
  • Induced Pluripotent Stem Cells / cytology
  • Induced Pluripotent Stem Cells / metabolism
  • Lentivirus / genetics*
  • Lung / cytology
  • Muscle Cells / cytology
  • Muscle Cells / metabolism
  • Muscle, Skeletal / cytology
  • RNA, Small Interfering / metabolism*
  • Reverse Transcriptase Polymerase Chain Reaction

Substances

  • DNA, Complementary
  • RNA, Small Interfering