PROMISCUOUS: a database for network-based drug-repositioning

Nucleic Acids Res. 2011 Jan;39(Database issue):D1060-6. doi: 10.1093/nar/gkq1037. Epub 2010 Nov 10.

Abstract

The procedure of drug approval is time-consuming, costly and risky. Accidental findings regarding multi-specificity of approved drugs led to block-busters in new indication areas. Therefore, the interest in systematically elucidating new areas of application for known drugs is rising. Furthermore, the knowledge, understanding and prediction of so-called off-target effects allow a rational approach to the understanding of side-effects. With PROMISCUOUS we provide an exhaustive set of drugs (25,000), including withdrawn or experimental drugs, annotated with drug-protein and protein-protein relationships (21,500/104,000) compiled from public resources via text and data mining including manual curation. Measures of structural similarity for drugs as well as known side-effects can be easily connected to protein-protein interactions to establish and analyse networks responsible for multi-pharmacology. This network-based approach can provide a starting point for drug-repositioning. PROMISCUOUS is publicly available at http://bioinformatics.charite.de/promiscuous.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amantadine / pharmacology
  • Antidepressive Agents, Tricyclic / adverse effects
  • Databases, Factual*
  • Dopamine Agents / adverse effects
  • Dopamine Agents / pharmacology
  • Drug Repositioning*
  • Memantine / adverse effects
  • Memantine / pharmacology
  • Mianserin / adverse effects
  • Mianserin / analogs & derivatives
  • Mirtazapine
  • Pharmaceutical Preparations / chemistry*
  • Protein Interaction Mapping
  • Proteins / antagonists & inhibitors
  • Proteins / chemistry

Substances

  • Antidepressive Agents, Tricyclic
  • Dopamine Agents
  • Pharmaceutical Preparations
  • Proteins
  • Mianserin
  • Mirtazapine
  • Amantadine
  • Memantine