Biodegradation of a biocide (Cu-N-cyclohexyldiazenium dioxide) component of a wood preservative by a defined soil bacterial community

Appl Environ Microbiol. 2010 Dec;76(24):8076-83. doi: 10.1128/AEM.01092-10. Epub 2010 Oct 15.

Abstract

The wood protection industry has refined their products from chrome-, copper-, and arsenate-based wood preservatives toward solely copper-based preservatives in combination with organic biocides. One of these is Cu-HDO, containing the chelation product of copper and N-cyclohexyldiazenium dioxide (HDO). In this study, the fate of isotope-labeled ((13)C) and nonlabeled ((12)C) Cu-HDO incorporated in wood sawdust mixed with soil was investigated. HDO concentration was monitored by high-pressure liquid chromatography. The total carbon and the δ(13)C content of respired CO(2), as well as of the soil-wood-sawdust mixture, were determined with an elemental analyzer-isotopic ratio mass spectrometer. The concentration of HDO decreased significantly after 105 days of incubation, and after 24 days the (13)CO(2) concentration respired from soil increased steadily to a maximum after 64 days of incubation. Phospholipid fatty acid-stable isotope probing (PFA-SIP) analysis revealed that the dominant PFAs C(19:0)d8,9, C(18:0), C(18:1)ω7, C(18:2)ω6,9, C(17:1)d7,8, C(16:0), and C(16:1)ω7 were highly enriched in their δ(13)C content. Moreover, RNA-SIP identified members of the phylum Acidobacteria and the genera Phenylobacterium and Comamonas that were assimilating carbon from HDO exclusively. Cu-HDO as part of a wood preservative effectively decreased fungal wood decay and overall microbial respiration from soil. In turn, a defined bacterial community was stimulated that was able to metabolize HDO completely.

MeSH terms

  • Bacteria / classification*
  • Bacteria / genetics
  • Bacteria / metabolism*
  • Biotransformation
  • Carbon Isotopes / metabolism
  • Chromatography, High Pressure Liquid
  • Cluster Analysis
  • Copper / metabolism*
  • Cyclohexanes / metabolism*
  • DNA, Bacterial / chemistry
  • DNA, Bacterial / genetics
  • DNA, Ribosomal / chemistry
  • DNA, Ribosomal / genetics
  • Disinfectants / metabolism*
  • Imides / metabolism*
  • Molecular Sequence Data
  • Phylogeny
  • RNA, Ribosomal, 16S / genetics
  • Sequence Analysis, DNA
  • Soil Microbiology*
  • Staining and Labeling / methods

Substances

  • Carbon Isotopes
  • Cyclohexanes
  • DNA, Bacterial
  • DNA, Ribosomal
  • Disinfectants
  • Imides
  • N-cyclohexyl-diazeniumdioxide
  • RNA, Ribosomal, 16S
  • Copper

Associated data

  • GENBANK/HM146328
  • GENBANK/HM146329
  • GENBANK/HM146330
  • GENBANK/HM146331
  • GENBANK/HM146332
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