Cloning and functional characterization of a novel endo-β-1,4-glucanase gene from a soil-derived metagenomic library

Appl Microbiol Biotechnol. 2011 Feb;89(4):1083-92. doi: 10.1007/s00253-010-2828-4. Epub 2010 Oct 12.

Abstract

A metagenomic library consisting of 3,024 bacterial artificial chromosome clones was prepared in Escherichia coli DH10B with high-molecular-weight DNA extracted from red soil in South China. A novel cellulase gene with an open reading frame of 1,332 bp, cel5G, encoding an endo-β-1,4-glucanase was cloned using an activity-based screen. The deduced enzyme, Cel5G, belongs to the glycosyl hydrolase family 5 and shares <39% identity with endoglucanases in the GenBank database. cel5G was expressed in E. coli BL21, and the recombinant enzyme Cel5G was purified to homogeneity for enzymatic analysis. Cel5G hydrolyzed a wide range of β-1,4-, β-1,3/β-1,4-, or β-1,3/β-1,6-linked polysaccharides, amorphous cellulose, filter paper, and microcrystalline cellulose. Its highest activity was in 50 mM citrate buffer, pH 4.8, at 50°C. Cel5G is stable over a wide range of pH values (from 2.0 to 10.6) and is thermally stable under 60°C. It is highly tolerant and active in high salt concentrations and is stable in the presence of pepsin and pancreatin. The K (m) and V (max) values of Cel5G for carboxymethyl cellulose are 19.92 mg/ml and 1,941 μmol min(-1) mg(-1), respectively. These characteristics indicate that Cel5G has potential for industrial use.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cellulase / chemistry
  • Cellulase / genetics*
  • Cellulase / isolation & purification
  • Cellulase / metabolism*
  • China
  • Cloning, Molecular
  • Enzyme Stability
  • Escherichia coli / genetics
  • Gene Expression
  • Hydrogen-Ion Concentration
  • Metagenome*
  • Molecular Sequence Data
  • Polysaccharides / metabolism
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / genetics
  • Recombinant Proteins / isolation & purification
  • Recombinant Proteins / metabolism
  • Sequence Analysis, DNA
  • Sequence Homology, Amino Acid
  • Soil Microbiology*
  • Substrate Specificity
  • Temperature

Substances

  • Polysaccharides
  • Recombinant Proteins
  • Cellulase

Associated data

  • GENBANK/GU585368