Discovery of biphasic thermal unfolding of ompc with implications for surface loop stability

Biochemistry. 2010 Nov 16;49(45):9715-21. doi: 10.1021/bi100877y. Epub 2010 Oct 20.

Abstract

Escherichia coli outer membrane protein C (osmoporin) is a close homologue of OmpF or matrix porin, expressed under conditions of high osmolarity or ionic strength. Despite the fact that the proteins display very similar structures (rmsd = 0.78 Å), the channel activities (gating or selectivity) of the two proteins are markedly different, and compared to OmpF, there is much less published information about the stability and folding of OmpC. In this paper, we report a structural study of nine OmpC mutations that affect channel size and voltage gating. The secondary and tertiary structural analysis by circular dichroism (CD) indicated that the single-amino acid substitutions have little impact on the protein fold. However, a thermal denaturation study using CD and differential scanning calorimetry shows that different mutations lead to varied levels of destabilization, with the largest showing a 15 °C lower T(m) than the wild type and a 40% reduction in ΔH(cal). CD thermal denaturation measurements revealed that OmpC unfolds in a biphasic process, in which only the second phase is affected by the known mutations. The first stage of unfolding was shown to be reversible and separate from the main unfolding and loss of trimeric structure occurring in the second phase, leaving the flexible extracellular loops as the likely site of unfolding. The first phase is abolished as OmpC becomes more stable at lower pH.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Amino Acid Substitution
  • Bacterial Outer Membrane Proteins / chemistry*
  • Bacterial Outer Membrane Proteins / genetics
  • Calorimetry
  • Circular Dichroism
  • Crystallography
  • Drug Stability
  • Escherichia coli / chemistry
  • Escherichia coli / genetics
  • Hydrogen-Ion Concentration
  • Models, Molecular
  • Porins / chemistry
  • Porins / genetics
  • Protein Denaturation
  • Protein Folding
  • Protein Structure, Secondary
  • Protein Unfolding
  • Spectrophotometry, Ultraviolet
  • Surface Properties
  • Thermodynamics

Substances

  • Bacterial Outer Membrane Proteins
  • OmpC protein
  • OmpF protein
  • Porins